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ipa knowledge base  (Qiagen)


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    Structured Review

    Qiagen ipa knowledge base
    Ipa Knowledge Base, supplied by Qiagen, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/ipa+knowledge+base/ipa+knowledge+base/pmc12038780-175-2-2
    Average 90 stars, based on 1 article reviews
    ipa knowledge base - by Bioz Stars, 2026-10
    90/100 stars

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    Related Articles

    other:

    Article Title: Hnrnph1 Is A Quantitative Trait Gene for Methamphetamine Sensitivity
    Article Snippet: IPA uses a manually curated database (IPA Knowledge Base) containing the published literature to extract gene networks containing equally treated edges that directly and indirectly connect biologically related genes ( www.qiagen.com/ingenuity ).

    Indirect Immunoperoxidase Assay:

    Article Title: Transcriptional Profiling of <scp>SSEA</scp>‐1<sup>+</sup> Endometrial Epithelial Progenitor Cells Highlights Their Role in Endometrial Regeneration, Remodeling, and Homeostasis
    Article Snippet: Using the QIAGEN IPA knowledge base, well- characterized metabolic and cell signaling pathways were explored based on overlap from the DEGs. .. Using the QIAGEN IPA knowledge base, well- characterized metabolic and cell signaling pathways were explored based on overlap from the DEGs. ..

    Article Title: Dosing and formulation of antenatal corticosteroids for fetal lung maturation and gene expression in rhesus macaques
    Article Snippet: Promoter GRE cis-element was scanned using the Msig-DB motif gene sets within 4 kb around their transcription starting sites ( http://software.broadinstitute.org/gsea/msigdb ). .. The evidence that NR3C1 regulates or interacts with genes in the top hits list was obtained via literature mining using Genomatix co-citation database (Genomatix Inc.) and IPA knowledge base (Ingenuity Pathway Analysis, QIAGEN). ..

    Article Title: Transcriptional Profiling of SSEA ‐1 + Endometrial Epithelial Progenitor Cells Highlights Their Role in Endometrial Regeneration, Remodeling, and Homeostasis
    Article Snippet: .. Using the QIAGEN IPA knowledge base, well‐characterized metabolic and cell signaling pathways were explored based on overlap from the DEGs. ..

    Article Title: RMRP variants inhibit the cell cycle checkpoints pathway in cartilage‑hair hypoplasia
    Article Snippet: .. After common DEGs were identified from the two sequencing data profiles, a comprehensive analysis was conducted using the IPA knowledge base (content version: 111725566; release date: March 21, 2024; Qiagen GmbH). ..

    Article Title: The aryl hydrocarbon receptor is a tumor suppressor–like gene in glioblastoma
    Article Snippet: .. The functional category and pathway analysis of differentially expressed genes in control and AhR knockdown cells were analyzed using the IPA (Qiagen Bioinformatics) Knowledge Base. .. The BD-Matrigel Invasion Chamber (24-Transwell with an 8-μm pore size polycarbonate membrane) was used in a modified Boyden chamber assay essentially as described previously ( 57 ).

    Protein-Protein interactions:

    Article Title: Transcriptional Profiling of <scp>SSEA</scp>‐1<sup>+</sup> Endometrial Epithelial Progenitor Cells Highlights Their Role in Endometrial Regeneration, Remodeling, and Homeostasis
    Article Snippet: Using the QIAGEN IPA knowledge base, well- characterized metabolic and cell signaling pathways were explored based on overlap from the DEGs. .. Using the QIAGEN IPA knowledge base, well- characterized metabolic and cell signaling pathways were explored based on overlap from the DEGs. ..

    Article Title: Transcriptional Profiling of SSEA ‐1 + Endometrial Epithelial Progenitor Cells Highlights Their Role in Endometrial Regeneration, Remodeling, and Homeostasis
    Article Snippet: .. Using the QIAGEN IPA knowledge base, well‐characterized metabolic and cell signaling pathways were explored based on overlap from the DEGs. ..

    Sequencing:

    Article Title: RMRP variants inhibit the cell cycle checkpoints pathway in cartilage‑hair hypoplasia.
    Article Snippet: cartilage‐hair hypoplasia (cHH) is an autosomal recessive form of metaphyseal chondrodysplasia caused by rna component of mitochondrial rna processing endoribo‐ nuclease (rMrP) gene variants; however, its molecular etiology remains unclear.. Whole‐exome sequencing was performed to detect possible pathogenic variants in a patient with a typical short stature and sparse hair. a co‐segregation analysis was also conducted and variants in the family members of the patient were confirmed by Sanger sequencing.. A novel compound heterozygous variant in rMrP (nr_003051.4: n.‐21_‐2dup and n.197C>T) was identified in the affected patient.

    Article Title: RMRP variants inhibit the cell cycle checkpoints pathway in cartilage‑hair hypoplasia
    Article Snippet: .. After common DEGs were identified from the two sequencing data profiles, a comprehensive analysis was conducted using the IPA knowledge base (content version: 111725566; release date: March 21, 2024; Qiagen GmbH). ..

    Functional Assay:

    Article Title: The aryl hydrocarbon receptor is a tumor suppressor–like gene in glioblastoma
    Article Snippet: .. The functional category and pathway analysis of differentially expressed genes in control and AhR knockdown cells were analyzed using the IPA (Qiagen Bioinformatics) Knowledge Base. .. The BD-Matrigel Invasion Chamber (24-Transwell with an 8-μm pore size polycarbonate membrane) was used in a modified Boyden chamber assay essentially as described previously ( 57 ).

    Control:

    Article Title: The aryl hydrocarbon receptor is a tumor suppressor–like gene in glioblastoma
    Article Snippet: .. The functional category and pathway analysis of differentially expressed genes in control and AhR knockdown cells were analyzed using the IPA (Qiagen Bioinformatics) Knowledge Base. .. The BD-Matrigel Invasion Chamber (24-Transwell with an 8-μm pore size polycarbonate membrane) was used in a modified Boyden chamber assay essentially as described previously ( 57 ).

    Knockdown:

    Article Title: The aryl hydrocarbon receptor is a tumor suppressor–like gene in glioblastoma
    Article Snippet: .. The functional category and pathway analysis of differentially expressed genes in control and AhR knockdown cells were analyzed using the IPA (Qiagen Bioinformatics) Knowledge Base. .. The BD-Matrigel Invasion Chamber (24-Transwell with an 8-μm pore size polycarbonate membrane) was used in a modified Boyden chamber assay essentially as described previously ( 57 ).



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